Function reference • BiocPkgTools

All functions
`setCache()` `pkgToolsCache()`	Manage cache for BiocPkgTools
`biocLastBuildDate()`	Deprecated functions in `BiocPkgTools`
`BiocPkgTools`	BiocPkgTools: Examine and analyze Bioconductor package metadata
`CRANstatus()`	Check the CRAN build report page and email a notification
`activitySince()`	What are the issues, pulls, commits created since a date?
`anacondaDownloadStats()`	Get download statistics for Bioconductor packages distributed via Anaconda.
`biocBuildEmail()` `sentHistory()`	Create and copy e-mail package notification template to clipboard
`biocBuildReport()`	Tidy Bioconductor build report results
`biocDownloadStats()`	Get Bioconductor download statistics
`biocExplore()`	Explore Bioconductor packages interactively
`biocMaintained()`	Bioconductor Maintained Packages
`biocPkgList()`	Get full Bioconductor software package listing, with details
`biocPkgRanges()`	Grab build report results from BUILD_STATUS_DB for a particular package range
`biocRevDepEmail()`	Notify downstream maintainers of changes in upstream package
`buildPkgDependencyDataFrame()`	Work with Bioconductor package dependencies
`buildPkgDependencyIgraph()`	Work with package dependencies as a graph
`buildClassDepGraph()` `buildClassDepData()` `buildClassDepFromPackage()` `plotClassDep()` `plotClassDepData()` `plotClassDepGraph()`	Retrieve Class relationships
`.get_cre_orcid()`	get the ORCID id from cre field of Authors@R in packageDescription result
`.get_orcid_rec()`	process employment data from ORCID
`firstInBioc()`	When did a package enter Bioconductor?
`generateBiocPkgDOI()`	Generate a DOI for a Bioconductor package
`getBiocVignette()`	Download a Bioconductor vignette
`getPackageInfo()`	Generate needed information to create DOI from a package directory.
`get_bioc_data()`	Get data from Bioconductor
`get_cre_orcids()`	get ORCID ids from cre fields of Authors@R in packageDescription results
`githubDetails()`	Get package details from GitHub
`githubURLParts()`	Extract GitHub user and repo name from GitHub URL
`inducedSubgraphByPkgs()`	Return a minimal subgraph based on package name(s)
`latestPkgStats()`	Summary of the latest package statistics
`orcid_table()`	get data.frame of employment info from orcid
`pkgBiocDeps()`	Look up a packages Bioconductor dependencies
`pkgCombDependencyGain()`	Calculate dependency gain achieved by excluding combinations of packages
`pkgDepImports()`	Report package imported functionality
`pkgDepMetrics()`	Report package dependency burden
`pkgDownloadRank()`	What is a package's download rank?
`pkgDownloadStats()`	Get Bioconductor download statistics for a package
`problemPage()`	generate hyperlinked HTML for build reports for Bioc packages
`repositoryStats()` `print(<repositoryStats>)`	Bioconductor Binary Repository Statistics
`subgraphByDegree()`	Subset graph by degree
`templatePath()`	Obtain the location of available email templates

Reference

All functions