The NCI SevenBridges Cancer Genomics Cloud Resource

Abstract

I demonstrate the use of the SevenBridges Cancer Genomics Cloud Resource to run RNA-seq and DNAse-seq workflows on cloud resources.

Date
Jul 7, 2018 12:00 AM
Location
Cold Spring Harbor Lab, Laurel Hollow, NY

Introduction

In this guided workshop, we will use the SevenBridges Cancer Genomics Cloud Resource to run simple RNA-seq workflow on cloud resources. Each participant will:

  1. Get an account on the platform.
  2. Learn to navigate through the features includes with the platform.
  3. Load the example date (below) into the platform.
  4. Use an existing RNA-seq pipeline to run analysis on the example data.

Example Data

RNA-seq

DNAse-seq

Professor of Medicine

My interests include biomedical data science, open data, genomics, and cancer research.

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