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All available organisms in refine.bio

Source: R/field_metadata.R
rb_organism_list.Rd

All available organisms in refine.bio

Usage

rb_organism_list()

Value

data.frame All available organisms.

See also

Other refine.bio API: rb_compendia_list(), rb_entity_list(), rb_institution_list(), rb_platform_list()

Author

Sean Davis seandavi@gmail.com

Examples

orgs <- rb_organism_list()
head(orgs)
#>                   name taxonomy_id has_compendia has_quantfile_compendia
#> 1   CIONA_INTESTINALIS        7719            NA                      NA
#> 2           MUS_PAHARI       10093         FALSE                    TRUE
#> 3 NOTAMACROPUS_EUGENII        9315         FALSE                    TRUE
#> 4  TAENIOPYGIA_GUTTATA       59729            NA                      NA
#> 5   PETROMYZON_MARINUS        7757            NA                      NA
#> 6   ANAS_PLATYRHYNCHOS        8839            NA                      NA