Parse a GSE mstrix file

Not meant for user calling, but parses a single GSEMatrix file.

Usage

parseGSEMatrix(
  fname,
  AnnotGPL = FALSE,
  destdir = tempdir(),
  getGPL = TRUE,
  parseCharacteristics = TRUE
)

Arguments

fname

filename

AnnotGPL

set to TRUE to get the annotation GPL version

destdir

the destdination directory for download

getGPL

whether or not to get the GPL associated

parseCharacteristics

Whether or not to do full 'characteristic' parsing