Plot the sample intensities

The Illumina methylation platforms all show a significant dye bias. The `plotSampleIntensities` method shows the density plots for the two channels, allowing direct visualization of the effect.

Usage

plotSampleIntensities(x,beta.cuts,s)

Arguments

x

An object of class MethyLumi or a subclass.

beta.cuts

Cutoffs for low and high beta values.

s

Sample number to plot.

Examples

data(mldat)
plotSampleIntensities(mldat, s = 1)
#> The purpose of this method is better served by diagnostics()